Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREELKGIFASVFGEKEGLRFFFAPGRVNLIGEHTDYNGGHVFPCALTMGTYAAVAERNDGLVRMYSDNFRNAGIKECSLDDIRYQKEDDWANYPKGVIYEFQQRGYAVPHGFDIVFSGNIPNGAGLSSSASIELLMGVVLQSYFHPEVDALELVKMAQHAENHFIGVNCGIMDQFAIGMGKKHHAMLLNCDTLDYEYSKLNVSGLALVIANTNKKRTLADSSYNTRRQECNDALLDLKKGLDIAALGDIKPSDFDAHSSLIQNETNRRRAKHAVYENHRAIKTAHMFKENNIDEIGQLMKESHLSLKDDYEVTCPELDELVFAAWDHEGVIGSRMTGAGFGGCTISIVK-DEFVDDFIQKVGDRYQEKTGLRADFYVADIGEGARELKGE
2OI2 Chain:A ((4-292))-----------------KVGVGQAHSKIILIGEHAVVYGYPAISLPLLEVEVTCKVVPAE----------------------------SPWRLYEEDTLSMAVYASLEYLNITEACIRCEIDEKRGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNRAEMIAHMNPSG-LDAKTCLSDQP----IRFIKNVGFTELEMD-LSAYLVIADTGVYGHTREAIQVVQNK-------------------------------------GKDALPFLHALGELTQQAEIAISQKDAEGLGQILSQAHLHLKE-IGVSSLEADSLVETALSH-GALGAKMSGGGLGGCIIALVTNLTHAQELAERLEEKGAVQTWIESL----------------


General information:
TITO was launched using:
RESULT:

Template: 2OI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1721 -154382 -89.70 -543.60
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -89.70
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.385

(partial model without unconserved sides chains):
PDB file : Tito_2OI2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OI2-query.scw
PDB file : Tito_Scwrl_2OI2.pdb: