Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGNTNGDSAFNKRTIAAALANYIDAGSIVAGSAGLS-LWVSYLKLSDTQIGLLGALSANAISAAVGALLGGFLADKV-GRKAVYTNSMLVYALGICLVLFGV-NFPMLLSGYIIIGLSVGADITASWTIIAENAPKK-NRARHCGVAQVAWAAGAVVVLLLSVLAGDL------GLLGNKIVFAHLLVIALITYILRIRLPESDAWQTKNQPEEA-QAEKP-------------------AVL-----------------N-KTSYFDLLKPMYLKSILFLMGVYLVWNLAAGVMGFFMPYIYQQVGGVS---------ANMANLLQMGLFIFTGLGVALIFMPFADKYR-KTVFGIAAFMAVIGWTLFLLPV-------EGLPILLLFIVVIGINNGAGQQANYQLWASEIFPTQYRASAQGLMFFLVRISIGIWSLFVPMIITNFG----------IGTMAAILLGCVTASMIIGLLFAPNTSGKSLEQIQEELYGSPQSQVKKGTESKIM
4TPH Chain:A ((31-481))------------------------------MQALIVYFMVQRLGFDDSRANLVWSAC--AALIYVSPAIGGWVGDKILGTKRTMLLGAGILSVGYALMTVPTENTWFMFSALGVIVVGNGLFKPNAGNLVRKIYE--SKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNAQYGNEFGWHAAFAVCCVGILVGLGNYALMHKSLANYGSEPDTRPVNKKSLAIVLALAALSVVASAIILEYEDVARVFVYAAGVAVLGIFFHL-------ERAGLIAALILTVQTVFFFIFYQQMSTSLALFALRNVDWDFQVFGTHLWTWSPAQFQALNPIWIMV-LSPVLAW------IAAKFALGFAVVAIGFFIYGFAGQFAVNGKTSSWVMIWGYASYSLGELLV-SGLGLAMIAR---------MMGAYFVASGISQYLGGVVANFASVPQDLVDPLQTLPVYTNLFNKLGVAAVVCTIIA------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4TPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1360 -153323 -112.74 -445.70
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -112.74
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.339

(partial model without unconserved sides chains):
PDB file : Tito_4TPH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TPH-query.scw
PDB file : Tito_Scwrl_4TPH.pdb: