Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRLENKTAVITGAATGIGQATAEVFANEGARVIIGDINKDQMEETVDAIRKNGGQAESFHLDVSDENSVKAFADQIKDACGTIDILFNNAGVDQEGGKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLMLENG-GSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNG--IRVNSISPGTIETPLIDKLAGTKEQEMGEQFREANKWITPLGRLGQPKEMATVALFLASDDSSYVTGEDITADGGIMAYTWPGKMLIEEKWKEETK
4NBT Chain:D ((2-238))-KKLEGKVAVITGGAKGLGQAIALAYAEEGAKVIAGDLGD---------LTYSHPNVEGMYLNVTDVTGVEKFYQSVIDKYGKIDILVNNAGITKDA-MTRKMTEAQWDAVIDVNLKGVFNLTRLVGPQMQTNGYGSIINISSVVGVFGNIGQANYAATKAGVIGLTMTWAKEFALKGANVRVNAIAPGYIMTDILK----TVPQDLLDKFAA----LTMLNRLGQPEEIAKVALFLASDDASYVTGQTINVNGGM--------------------


General information:
TITO was launched using:
RESULT:

Template: 4NBT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1319 -64640 -49.01 -276.24
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain D : 0.78

3D Compatibility (PKB) : -49.01
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_4NBT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NBT-query.scw
PDB file : Tito_Scwrl_4NBT.pdb: