Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGSV------DRPDQNRGERSMKSPGLDLVRRTLDEARAAAR--------------ARGQDAGRGRVASVASGRVAGRRRSWSG------PGPDIRDPQPLGKAARELAKKRGWSVRVAEGMVL--------GQWSAVVGHQIAEHARPTALNDGVLSVIAESTAWATQLRIMQAQLLAKIAAAVGNDVVRSLKITGPAAPSWRKGPRHIAGRGPRDTYG----------------------------- |
1JJ2 Chain:C ((1-246)) | MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVK----TQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15031 for 1054 contacts (14.3/contact) +
2D Compatibility (PS) -19531 + (NN) -6086 + (LL) 232
1D Compatibility (HY) -400 + (ID) 1550
Total energy: -12304.0 ( -11.67 by residue)
QMean score : 0.183
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