Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------------------MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRID--------EFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR
1G2A Chain:A ((1-164))
SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVD-----IHQRIIVIDVS-E--NRD--ERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS--PLKQQRIRQKVEKLDRL-----
General information:
TITO was launched using:
RESULT:
Template:
1G2A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51950 for 874 contacts (-59.4/contact) +
2D Compatibility (PS) -13197 + (NN) -2807 + (LL) 984
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -70770.0 ( -80.97 by residue)
QMean score : 0.133
(partial model without unconserved sides chains):
PDB file :
Tito_1G2A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2A-query.scw
PDB file :
Tito_Scwrl_1G2A.pdb
: