Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDRIHVQPAHLRQAAAHHQQTADYLRTVPSSHDAIRESLDSLGPIFSELRDTGRELLELRKQCYQQQADNHADIAQNLRTSAAMWEQHERAASRSLGNIIDGSR
3GWK Chain:C ((2-98))
AMSQIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVID--ENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTDADIASQISG------
General information:
TITO was launched using:
RESULT:
Template:
3GWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1397 for 538 contacts (2.6/contact) +
2D Compatibility (PS) -10431 + (NN) -1849 + (LL) 380
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -13703.0 ( -25.47 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_3GWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWK-query.scw
PDB file :
Tito_Scwrl_3GWK.pdb
: