Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MFLAGVLCMCAAAASAL----FGSWSLCHTPTADPTALALRAM---------APTQLAAAVMLAAGGVVAVAAPGHTALM------------VVIVCIAGAVGTLAAGSWQSAQYALRRETA----SPTANCVGSCAVCTQACH-
4MTE Chain:A ((4-152))
TTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISAYDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQPTHTSAMFICDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEAC
General information:
TITO was launched using:
RESULT:
Template:
4MTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85584 for 710 contacts (-120.5/contact) +
2D Compatibility (PS) -12855 + (NN) -8532 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -113771.0 ( -160.24 by residue)
QMean score : 0.177
(partial model without unconserved sides chains):
PDB file :
Tito_4MTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MTE-query.scw
PDB file :
Tito_Scwrl_4MTE.pdb
: