Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSLVRPDLPVRIGVQLQPQHA------PHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGK----------------LNPPPTR--DIPVLIGGGGERKTLRLVAEYADIWHSFT--AGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR |
1LUC Chain:A ((1-256)) | ----------MKFGNFLLTYQPPELSQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEF----GLLGNPYVAAAHLLGATETLNVGTAAIVLPTAHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGTDMD---NSRALMDCWYDLMKEGFNEGYIAADNEHIKFPKIQLNPSAYTQGGAPVYVVAESAS-TTEWAAERGLPMILSWIINTHEKKAQLDLYNEVATEHGYDVTKIDHCLS--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98698 for 1597 contacts (-61.8/contact) +
2D Compatibility (PS) -22066 + (NN) -13766 + (LL) 2224
1D Compatibility (HY) -3600 + (ID) 1700
Total energy: -137606.0 ( -86.17 by residue)
QMean score : 0.425
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