Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDECVVDAAAVVDALAGKGASAIVLRGLLKE------SISNAPHLLDAEVGHALRRAVLSDEISEEQARAALDALPY-LIDNRYPHSPRLIEYTWQL--R----HNVTFYDALYVALATALDVPLLTGDSRLAAAPGLPCEIKLVR
1W8I Chain:A ((1-128))
-MAALIDTGIFFGFYSLKDVHHMDSVAIVVHAVEGKWGRLFVTNHILDETLTLLKYKK-------LPADKFLEGFVESGVLNIIYTDDEVERKALEVFKARVYEKGFSYTDAISEVVAEELKLKLISYDSRFSLPT----------
General information:
TITO was launched using:
RESULT:
Template:
1W8I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21318 for 840 contacts (-25.4/contact) +
2D Compatibility (PS) -12309 + (NN) -4282 + (LL) 1136
1D Compatibility (HY) 1600 + (ID) 400
Total energy: -35573.0 ( -42.35 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_1W8I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W8I-query.scw
PDB file :
Tito_Scwrl_1W8I.pdb
: