Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSITVSVDPVDPVDP----------------VDPVDPVDAVVAAGSDGL--------------------------------TVARIESEIGALEFLNELRTELKSGQFRPQPVRERKIPKPGGLGKVRRLGI--PTVADRVVQA-ALKLVLEPIFETDFEPVSYGFRPARR------AHDTIAEIHLFGTQEYRWVLDADIKACFDRIDHADLMDRVRHRIKDKRVLRLVNWQRIRHRWNWTDVRRWLTDPTGRWHPISADGITLFNPAAVPIRRYRYRGNTIPTPWTQAV--------------------------------- |
3DAD Chain:A ((14-339)) | -SVVTVRVQYLEDTDPFASANFPEPRRAPTCSLDGALPLGAQIPAVHRLLGAPLKLEDSALQVSPSGYYLDTELSLEEQREMGFYEEISKGRKPTLILRTQLSVRVNAILEKLYSSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQRHLGTAGTDVDLRTQLVLYENALKLEDG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30869 for 1663 contacts (-18.6/contact) +
2D Compatibility (PS) -23309 + (NN) 6660 + (LL) 208
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -55860.0 ( -33.59 by residue)
QMean score : 0.186
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