Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSITVSVDPVDPVDP----------------VDPVDPVDAVVAAGSDGL--------------------------------TVARIESEIGALEFLNELRTELKSGQFRPQPVRERKIPKPGGLGKVRRLGI--PTVADRVVQA-ALKLVLEPIFETDFEPVSYGFRPARR------AHDTIAEIHLFGTQEYRWVLDADIKACFDRIDHADLMDRVRHRIKDKRVLRLVNWQRIRHRWNWTDVRRWLTDPTGRWHPISADGITLFNPAAVPIRRYRYRGNTIPTPWTQAV---------------------------------
3DAD Chain:A ((14-339))-SVVTVRVQYLEDTDPFASANFPEPRRAPTCSLDGALPLGAQIPAVHRLLGAPLKLEDSALQVSPSGYYLDTELSLEEQREMGFYEEISKGRKPTLILRTQLSVRVNAILEKLYSSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQRHLGTAGTDVDLRTQLVLYENALKLEDG


General information:
TITO was launched using:
RESULT:

Template: 3DAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30869 for 1663 contacts (-18.6/contact) +
2D Compatibility (PS) -23309 + (NN) 6660 + (LL) 208
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -55860.0 ( -33.59 by residue)
QMean score : 0.186

(partial model without unconserved sides chains):
PDB file : Tito_3DAD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DAD-query.scw
PDB file : Tito_Scwrl_3DAD.pdb: