Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MEPKRSRLVVCAPEPSHAREFPDVAVFSGGRANASQAERLARAVGRVLADRGVTGGARVRLTMANCADGPTLVQINLQVGDTPLRAQAATAGIDDLRPALIRLDRQIVRASAQWCPRPWPDRPRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAE-----TGEDAVVYRAGPSG----LRLARQHHVFPPGWSRCRAPAGPPVPLIVNSRPTPVLTEAAAVDRAREHGLPFLFFTDQATGRGQLLYSRYDGNLGLITPTGDGVADGLA |
| 2A1F Chain:A ((1-239)) | LSQPIYKRILLKL----------SGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMNGLAMRDSLFRAD-----------------------VNAKLMSAFQLNGICDTYNWSEAIKMLR--EKRVVIFSAGTGNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCA------KLYKNLSYAEVIDKELKVMDLSAFTLARDHGMPIRVFN--MGKPGALRQVVTGTEEGTTICEG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75240 for 1800 contacts (-41.8/contact) +
2D Compatibility (PS) -24253 + (NN) -13149 + (LL) 2720
1D Compatibility (HY) -1600 + (ID) 1600
Total energy: -113122.0 ( -62.85 by residue)
QMean score : 0.323
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