Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLKVKGEGLGAQVTGV-DPKNLDDITTDEIRDIVYTNKLVVLKDVHPSPREFIKLGRIIGQIVP-YY-EPMYHHEDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHDPRRHIKIRPSDVYRPIGEVWDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIEDKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKH-GS-AAGTLTTYRLTMLDGLKTPGYAA |
| 5HSX Chain:A ((20-302)) | IEVTPLSAHIGAEIHGVDLTQKLEARQIAEIRAALLKWRVVFFREQFLTHEQHVAFSAQFGELTLG--VFG--HVEGHPEVYSISKY--QTLQRPWTGWHTDVTAAVNPPWASILRGVTIPPYGGDTQWTNLVAAYQKLSAPLRSFVDGLRGIHRFTP----------------------RILVTEHPLVRVHPETGERALYVSPSFLKSIVGVSPRES-QVLLELLWEHVTR------PEFTVRFKWQAGSVAFWDNRATAHLAPTDIFDLDFDRQLYRTTLVGDVPVGPD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5HSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136731 for 2049 contacts (-66.7/contact) +
2D Compatibility (PS) -27228 + (NN) -11320 + (LL) 2256
1D Compatibility (HY) -5200 + (ID) 2700
Total energy: -180923.0 ( -88.30 by residue)
QMean score : 0.486
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