Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDRILAAVCDVLY---IDEADLIDGDETDLRDLG-LDSVRFVLLMKQL----GVNRQSELPSRLAA--NPSIAGWLRELEAVCTEFG
2N5H Chain:A ((8-85))
--EKIRRYIMEDLIGPSAKEDELD--DQTPLLEWGILNSMNIVKLMVYIRDEMGVS--IPST-HITGKYFKDLNAISRTVEQLKA---
General information:
TITO was launched using:
RESULT:
Template:
2N5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39206 for 399 contacts (-98.3/contact) +
2D Compatibility (PS) -7401 + (NN) -4107 + (LL) 316
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -56448.0 ( -141.47 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2N5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2N5H-query.scw
PDB file :
Tito_Scwrl_2N5H.pdb
: