Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPVILVAGQDHT--DEVTGALLR-R---TGTVVVEHRFDGHVVRRMTATLSRGELITTEDALEFAHGCVSCTIRDDLLVLLRRLHRRDNVGRIVVHLAPWLEPQPICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSLGEDELPDGRTVAQVTVGQAEFADLLVLTHPE---P--V----AVAVLRRLAPRARITGGVDRVELALAHLDDNSRRGRTDTPHTPLLAGLPPLAADGEVAIVEFSARRPFHPQRLHAAVDLLLDGVVRTRGRLWLANRPDQVMWLESAGGGLRVASAGKWLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADPTDIVNALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAGEFSAHRNSGESR |
| 2HF9 Chain:A ((37-202)) | -GVVAFDFMGAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERMEKH-------GAKVVPLNTGKECHLDAHLVGHALEDLN-LDEIDLLFIENVGNLICPA---D----------------F--DLGTHKRIVVISTTEGDDTI-------------EKHPGIMKTADLIVINKIDLADAVGADIKKMENDAKRINPDAEVVL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2HF9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -112366 for 1227 contacts (-91.6/contact) +
2D Compatibility (PS) -16248 + (NN) -8001 + (LL) 14456
1D Compatibility (HY) -400 + (ID) 800
Total energy: -123359.0 ( -100.54 by residue)
QMean score : 0.473
|
|
|