Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVWITGAGGMMGSHLAEMLLAAGHDV-----YATYCRPTIDPSDLQFNGAEVDITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAKIIVAGSSAEYGFVDPSEVPINERRE----LRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIFNCTGPRK--VGDA--LSDFVRRCTWLEHHPEQSAIRV--GNLKTKRTIVDVRDLNRALMLMLDKGEAGADYNVGGSIAYEMGDVLKQVIAACKRDDIVPEVDPALLRPTD-EKIIYGDCSKLAAITGWQQEICLTQTIADMFDYWRSKSESALMV |
| 2P5U Chain:B ((1-309)) | MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-PKGVPFF--RVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYG-----EVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERV--LKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSLE--GIYNVGTGEGHTTREVLMAVAEAAGK---APEVQPAPPRPGDLERSVLSPLKLMA--HGWRPKVGFQEGIRLTVDHFRG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165254 for 2531 contacts (-65.3/contact) +
2D Compatibility (PS) -30944 + (NN) -9185 + (LL) 1388
1D Compatibility (HY) -11600 + (ID) 5300
Total energy: -220895.0 ( -87.28 by residue)
QMean score : 0.414
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