Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKPRNPADYVIGDDVEVSDVDLKQEEVYVDGERLTDERVEQMASESLRLAREREANLIPGGKSLSGGSAHSPAVQVVVSKATHAKLKELARSRKMSVSKLLRPVLDEFVQRETGRILPRR
1BAZ Chain:A ((5-50))
----------------------------------------------------------------------SKMPQVNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGR------
General information:
TITO was launched using:
RESULT:
Template:
1BAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11670 for 208 contacts (-56.1/contact) +
2D Compatibility (PS) -5232 + (NN) -3055 + (LL) 4348
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -17559.0 ( -84.42 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_1BAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BAZ-query.scw
PDB file :
Tito_Scwrl_1BAZ.pdb
: