Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVA--VGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEET-LNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASD--NFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIG----PTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 1SOZ Chain:B ((39-311)) | ------------------------------------------------------------------------------GSGVIMDQRGYIITNKHVINDADQI-IVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQT----------ITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGR----------------IVVNE----GPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPV-----------LQVTIQEYP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121280 for 1734 contacts (-69.9/contact) +
2D Compatibility (PS) -25608 + (NN) -15488 + (LL) 5808
1D Compatibility (HY) -15600 + (ID) 4250
Total energy: -176418.0 ( -101.74 by residue)
QMean score : 0.314
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