Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRSDTLATKLPWSDWLSRQRWYAGRNRELATVKPGVVVALRHNLDLVLVDVTYTDGATERYQVLVGWDFEPASEYGTKAAIGVADDRTGFDALYDVAGPQFLLSLIVSSAVCGTSTGEVTFTREPDVELPFAAQPRVCDAEQSNTSVIFD----RRAILKVFRRV---SSGINPDIELNRVLTRAGNPHVARLLGAYQFGRPNRSPTDALAYALGMVTEYEANAAEGWAMATASVRDLFAEGDLYAHEVGGDFAGESYRLGEAVASVHATLADSLGTAQ--A--TFPVDRMLARLSSTVAVVPE-LREYAPTIEQQFQKLAA---EAITVQRVHGDLHLGQVLRTPESWLLIDFEGEPGQPLDERRAPDSPLRDVAGVLRSFEYAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVYETGYETRHRPGWLPIPLRSIARLTAS |
| 1ZYL Chain:A ((31-282)) | ---------------------------------------------------------------------------------------------------------------------------------------LTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVP-VAAPVAF-NGQTLL-----NHQGFYFAVFPSVGGRQFE-----------------------ADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRD-GPMFVDLDD---------ARNGPAVQDLWMLLNGDK---------------------AEQRMQLETIIEAYEEFSEFDTAEI-GLIEPLRAMRLVYYLAWLM-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ZYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -44491 for 1724 contacts (-25.8/contact) +
2D Compatibility (PS) -24870 + (NN) -2951 + (LL) 14364
1D Compatibility (HY) -7600 + (ID) 1850
Total energy: -67398.0 ( -39.09 by residue)
QMean score : 0.315
|
|
|