Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAESIVRYVA
1IQ6 Chain:A ((3-133))
------AQSLE--VGQKAR--LSKRFGAAEVAAFAALSEDFNPLHLDPAFAATTAFERPIVHGMLLASLFSGLLGQQ--L-P-GKGSIYLGQSLSFKLPVFVGDEVTAEVEVTALREDK---PIATLTTRIFTQGG-ALAVTGEAVVKL--
General information:
TITO was launched using:
RESULT:
Template:
1IQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60920 for 966 contacts (-63.1/contact) +
2D Compatibility (PS) -14628 + (NN) -4738 + (LL) 1628
1D Compatibility (HY) -4800 + (ID) 1750
Total energy: -85208.0 ( -88.21 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_1IQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IQ6-query.scw
PDB file :
Tito_Scwrl_1IQ6.pdb
: