Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKG--EVRAMVR-PAA-NTR---SI-DDLPLTRFHGDVFDTATVAEAM--AGCDDVYYCVVDTRAWLRDPSPLFRTNVAGLRNVLDVATDASLRRFVFTSSYATVGRRRG-HVATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGRTPHGAFIAGAVFGR-LPFTM--RGIRLEAVGVDDAARALILAAERGRNGERYLISER-MMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPR-PVEESIREAARFWAAMRTVGKDPAAS |
| 4EGB Chain:A ((24-339)) | -AMNILVTGGAGFIGSNFVHYMLQ----SYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAES-------IPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPL--APNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRD-WLHVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKD--IE-YVT-------D------------------GHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKNEE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139845 for 2408 contacts (-58.1/contact) +
2D Compatibility (PS) -31765 + (NN) -13315 + (LL) 3020
1D Compatibility (HY) -11200 + (ID) 3050
Total energy: -196155.0 ( -81.46 by residue)
QMean score : 0.559
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