Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFPRTLAILAAAAALVVACSHGGTPTGSSTTSGASPATPVAVPVPRSCAEPAGIPALLSPRDKLAQLLVVGVRDAA---------------DAQAVVTNYHVGGI-LIGSDTDLTIFDGALAEIVAGGGP-LPLAVSVDEEGGRVSRLRSLIGGTGPSARELAQTRTVQQVRDLARDRGRQMRKLGITIDFAPVVDVTDAPDDTVIGDRSFGSDPATVTAYAGAYA-QGLRDAGVLPVLKHFPGHGRGSGDSHNG-GVTTPPLDDLVGDDLVPYRTLVTQAPVGVMVGHLQVPG---------LTGSE---PASLSKAAVN-LLRTGTGYGAPPFDGPVFSDDLSGMAAISDRFGVSEAVLRTLQAGADIALW---VTT----KEVPAVLDRLEQALRAGELPMSAVDRSVVRVATMKGPNPGCGR |
| 3LK6 Chain:D ((16-367)) | ----------------------------------------------------------MSLDEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFAENVKTTKQTVQLTDDYQKASPKIPLMLSIDQEGGIVTRLGE--GTNFPGNMALGAARSRINAYQTGSIIGKELSALGINTDFSPVVDINNNPDNPVIGVRSFSSN-RELTSRLGLYTMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLVSHGQERLREVELYPFQKAIDAGADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMG-----FNGVIVTNALN-MKAIADHFGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135502 for 2749 contacts (-49.3/contact) +
2D Compatibility (PS) -34219 + (NN) -19756 + (LL) 2184
1D Compatibility (HY) -22800 + (ID) 5700
Total energy: -215793.0 ( -78.50 by residue)
QMean score : 0.398
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