Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPA----SADGACELLRG----IVALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHRPPARFDEFSLPTRVGARADERLRS-GVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS |
| 4M02 Chain:A ((36-204)) | ------------------------------------------------------------------AVTQVRYVDVTTGKDIIPPKTYSGNVDQVVTIDNQQSALTAKGYNYTSVDSSYASTYNDTNKTVKMTNAGQSVTYYFTDVKAPTVTVG----NQTIEVGKTMNPIVLTTTDNGTGTVTNTVTGLPSG-----LSYDSATNSIIGTPTKIGQSTVTVVSTD-QANNKSTTTFTINVVDTT----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45214 for 1100 contacts (-41.1/contact) +
2D Compatibility (PS) -16625 + (NN) -4037 + (LL) 8588
1D Compatibility (HY) -2000 + (ID) 1500
Total energy: -60788.0 ( -55.26 by residue)
QMean score : 0.317
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