Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLSLLWVLRGWRRPDDVRVRPTAA-SLPGVEMVTATVAHIDIAAQVVHTDN-SVIGYDALVIALGAALNTDAVPGLSDALDADVAGQFYTLDGAAELRAKVEALE-HGRIAVAIAGVPFKCPAAPFEAAFLIAAQLGDRYATGT-VQIDTFTPDPLPMP---VAGPEVGEALVSMLKDHGVGFHPRKALARVDEAARTM--HFGDGTSEPFDLLAVVPPH-----VPSAAARS-AGL-SESGWIPVDPRTLST-SADNVWAIGDATVLTLPNGK----PLPKAAVFAEAQAAVVAHGVARHLGYDVAERHF-TGTGACYVETGDHQAAKGDGDFFAPSAPSVTLYPPSREFHEEKVAQELAWLTRWKT |
| 3SX6 Chain:A ((3-406)) | GSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHE--GPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDE-HQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQTMGTWNAVAFADMGDRGAAFIALPQLKPRKV--DVFAYGRWVHLAKVAFEKYFIRKMK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SX6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208439 for 3229 contacts (-64.6/contact) +
2D Compatibility (PS) -42300 + (NN) -25631 + (LL) 384
1D Compatibility (HY) -10000 + (ID) 4350
Total energy: -290336.0 ( -89.92 by residue)
QMean score : 0.465
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