Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPRRRRW-LSKTEFLSRLRGAQADPGLRNDLAVLAGDTTEDLGPIR
2ODK Chain:A ((3-53))
MHVWPVQDAKARFSEFLDACITEGPQIVSRRGAEEAVLVPIGEWRRLQAAA------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ODK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8204 for 282 contacts (-29.1/contact) +
2D Compatibility (PS) -5606 + (NN) -3901 + (LL) 1728
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -17633.0 ( -62.53 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_2ODK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ODK-query.scw
PDB file :
Tito_Scwrl_2ODK.pdb
: