Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVV------HSYAGYENKVKANLETRV-QNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI |
2XHC Chain:A ((168-352)) | -------------------------------------------EQDVYYIPLDVFDRDRIKKGKEVKQGEMLAEARKFFAKV-SGRVEVVDYSTRK---EIRIYKTKRRKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSSGGQPVPVKDREMRPILRLAGLEEY----------------------ELGFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPVVLHVSEVEKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49392 for 889 contacts (-55.6/contact) +
2D Compatibility (PS) -17964 + (NN) 179 + (LL) 4796
1D Compatibility (HY) -11600 + (ID) 2600
Total energy: -76581.0 ( -86.14 by residue)
QMean score : 0.397
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