Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSPVAVIARFMPRPDARSALRALLDAMITPTRAEDGCRSYDLYESADG-GELVLFERYRSRIALDEHRGSPHYLNYRAQVGELLTRPVAVTVLAPLDEASA
3E8O Chain:A ((18-115))
--TMVISHGTLSASAEHAAHLRQLLVHIAQATRQEDGCLLYLVSEDLSQPGHFLITEHWDNLGAMHTHLALPGVTQAIDALKHLNVTDLKITAYEAGEAI--
General information:
TITO was launched using:
RESULT:
Template:
3E8O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41059 for 640 contacts (-64.2/contact) +
2D Compatibility (PS) -10831 + (NN) -5204 + (LL) 376
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -60918.0 ( -95.18 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_3E8O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E8O-query.scw
PDB file :
Tito_Scwrl_3E8O.pdb
: