Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDA--HHTHLDAGRIAEAEGAAAVALHARTAAQRYSG--TADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
3B0P Chain:A ((2-318)) | -------------------LDPRLSVAPMVDRTDRHFRFLVRQVSLG------VRLYTEMTVDQAVLRGNRE--RLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFG-YDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEA---VRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSAL-----IPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEADRRVFGLP--RRPSRLEVARRMRAYLEEEVL-KG--TPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVGE------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208137 for 2589 contacts (-80.4/contact) +
2D Compatibility (PS) -32914 + (NN) -16781 + (LL) 2404
1D Compatibility (HY) -13200 + (ID) 4250
Total energy: -272878.0 ( -105.40 by residue)
QMean score : 0.494
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