Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPEPPHHENAELAAMNLEMLESQPVPEIDTLREEIDRLDAEILALVKRRAEVSKAIGKARMASGGTRLVHSREMKVIERYSELGPD------GKDLAILLLRLGRGRLGH
2D8D Chain:A ((3-82))
--------------------------ERIQALRKEVDRVNREILRLLSERGRLVQEIGRLQTELGLPHYDPKREEEMLAYLTAENPGPFPDETIRKLFKEIFKASL-----
General information:
TITO was launched using:
RESULT:
Template:
2D8D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2259 for 347 contacts (-6.5/contact) +
2D Compatibility (PS) -8663 + (NN) -8429 + (LL) 1832
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -22419.0 ( -64.61 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_2D8D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D8D-query.scw
PDB file :
Tito_Scwrl_2D8D.pdb
: