Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLR---GDDVVGGLGDRARFAQADVTDEAAVSNALELAD-SLGPVRVVVNCAGTGNAIRV--LSRDGVFPLAAFRKIVDINLVGTFNVLRLGAERIAKTEP-IGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIRLDGAIRMAPR
1U7T Chain:B ((9-261))
---KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVRNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRMQP-
General information:
TITO was launched using:
RESULT:
Template:
1U7T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150540 for 2073 contacts (-72.6/contact) +
2D Compatibility (PS) -26425 + (NN) -11126 + (LL) 424
1D Compatibility (HY) -24400 + (ID) 7600
Total energy: -219667.0 ( -105.97 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_1U7T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U7T-query.scw
PDB file :
Tito_Scwrl_1U7T.pdb
: