Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLK--TPPELLPELRIEERTV-GYDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLPSFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLAPGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA |
3AIM Chain:D ((41-322)) | -----------------------------ASVEEIRSLFKQFSSLTPREEVG--KIEDITIPGSE--TNIKARVYYPKT-QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVTAILSKK-ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLR----SFADLLDFRFSPILADLNDLPPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVEFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146963 for 2507 contacts (-58.6/contact) +
2D Compatibility (PS) -30545 + (NN) -16357 + (LL) 3060
1D Compatibility (HY) -21200 + (ID) 5700
Total energy: -217705.0 ( -86.84 by residue)
QMean score : 0.586
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