Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGALGIATGATHGLLQETTREVRWVRSTQIVAGHRTHPLRVA------GMIGTVAAVVIAGSS--PLWSRQLFVEGRWLSVG----------LLSVGVAGFC----AQATLLGALAGVDRWTQYG--------------------SLMVTDAVI----RLAVAAAAVVIGWGLAGYL------------------WAATAGAVAWLLML-------MASPTARSAASLLTP--------GGIATFVRGAAHSITAAGASAIL----------------VMGFPVLLKVTSDQLGAKGGAVIL-----AVTLTRAPLLVPLSAMQGNLIAHFVDRRTQRLRALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGPDYQTGGALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYLLGWVSATVASTLLLLLPMPLETRTVIALLFGPTVGIAIHVAALARRPD |
| 4TWA Chain:A ((3-497)) | --MAITSKKIENFSDWYTQVIVKSELIEYYDISGCYILRPAAYYIWECVQAFFNKEIKKLN-VENSYFPLFVTKNKLEKEKNH--IEGFSPEVAWVTKY----GDSNLPEEIAIRPTSETIMYSVFPKWIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTNFAKMFKIEFEDENEVKQYVHQTSWGCTTRSIGIMIMTHGDDKGLVLPPNVSKYKVVIVPIFYKTTDENAIHSYCKDIEKILKNAQINCVYDDRASYSPGYKFNHWELRGIPIRIEVGPKDLQNNSCVIVRRDNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDSIVQ------VTSFSEVMNALNKKKMVLAPWCEDIATEEEIKKETQRLS-----LTLSGAM--------------------KPLCIPLDQPPMPPNMKCFWSGKP---AKRWCLFGRSY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -283828 for 2754 contacts (-103.1/contact) +
2D Compatibility (PS) -40819 + (NN) -3897 + (LL) 4580
1D Compatibility (HY) -21600 + (ID) 3300
Total energy: -348864.0 ( -126.68 by residue)
QMean score : 0.221
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