Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADIPYGTDYPDAPWIDRDGHVLIDDGGKPTQVHRGQARIAYRLAERYQDKLLHVAGIGWHSWDGRRWAADDRGEAKRAVLAELRQALSDSLNDKELRADVRKCESASGVAGVLDLAAALVPFAATVADLDSDPHLLNVANGTLDLHTLKLRPHAPADRITKICRGAYQSDTESPLWQAFLTRVLPDEGVRGFVQRLAGVGLLGTVREHVLAILIGVGANGKSVFDKAIRYALGDYACTAEPDLFMHRENAHPTGEMDLRGVRWVAVSESEKDRRLAESTIK--------RLTGGDTIRARKMRQDFVEFTPSHTPLLITN-HLPRVPGDDT------------------------AIWRRIRVVPFEVVIPADEQDR----ELDARLQLEADSILSWAVAGWSDYQRIGLSQPDAVLAATSNYREDSDTIKR-----FID------DECVTSSPVLKATTTHLFEAWQRWRVQEG----VPEISRKAFGQSLDTHGYPVTDKARDGRWRAGIAVRGADDFDD |
| 3KHK Chain:A ((7-530)) | --------QQFLNDLDNQLWRAADKLRSNLDAANYKHVVLGLIFLKYVSDAFEERQQELTELFQKDDDDNIYYLPREDYDSDEAYQQAIAEELEIGDYYTEKNVFWVPKTARWNKLRDVITLPTSVSWLIDNAFDDIEKANPKLKGILNRISQYQLDADKLIGLINEFSKDILGHVYEYFLGQFALAEGKQG--------GQYYTPKSIVTLIVEMLEPYKGRVYD--PAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLVE-CMVALPGQLFTNTQIPACIWFLTKDKNAKNGKRDRRGQVLFIDARKLGYMKDRVLRDFKDEDIQKLADTFHNWQQEWSEENNQAGFCFSADLALIRKNDFVLTPGRYVG---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KHK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20908 for 3286 contacts (-6.4/contact) +
2D Compatibility (PS) -46637 + (NN) -15556 + (LL) 2328
1D Compatibility (HY) -400 + (ID) 2200
Total energy: -83373.0 ( -25.37 by residue)
QMean score : 0.199
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