Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQAATRPTNDAGQDGGNNSDILVVARQQVLQRGEGLNQDQVLAVLQLP-DDRLEELLALAHEVRMRWCGPEVEVEGIISLKTGGCPEDCHFCSQSGLFASPVRSAWLDIPSLVEAAKQTAKSGATEFCIVAAVRGPDERLMAQVAAGIEAIRNE-----VEINIACSLGMLTAEQVDQLAARGVHRYNHNLETA-RSFFANVVT---THTWEERWQTLSMVRDAGME-VCCGGILGM-GETLQQRAEFA---AELAEL--GPDEVPLNFLNPRPGTPFADLE-VMPVGDALKAVAAFRLALPRTMLRFAGGREITLGDLGAKRGILGGINAVIVG------NYLT-T------LGRPAEADLELLDELQMPLKALNASL |
4WCX Chain:A ((48-396)) | ----------------------------EKAKNLKGITPEEAAVLLNVEDEDLLNEMFKVARYIKEEIYGNRIVIFAPLYV-SNYCVNNCRYCGYRHSNE--QQRKKLTMEEVRREVEILEEMGHKRLAVE-AGEDPVNCPIDYIVDVIKTIYDTKLKNGSIRRVNVNIAATTVENYKKLKKVGIGTYVLFQETYHRPTYEYMHPQGPKHDYDYHLTAMDRAMEAGIDDVGLGVLYGLYDYKYETVAMLYHANHLEEKFGVGPHTISVPRLRPALNISIDKFPYIVSDKDFKKLVAVIRMAVPYTGMILST-REK--PKFREE-VISIGISQISAGSCTGVGGYHEEKPQFEVEDKRSPNEILRTLCEQGYLPSYCTA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162782 for 2529 contacts (-64.4/contact) +
2D Compatibility (PS) -34719 + (NN) -22099 + (LL) 1456
1D Compatibility (HY) -12800 + (ID) 2750
Total energy: -233694.0 ( -92.41 by residue)
QMean score : 0.504
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