Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIDPDQIRAEIDALLASLPDPADAENGPSLAELEGIARRLSEAHEVLLAALESAEKG
1PGY Chain:A ((1-47))
--ALVDEVKDMEIARLMSL--------GLSIEEATEFYENDVT-YERYLEILKSKQKE
General information:
TITO was launched using:
RESULT:
Template:
1PGY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12506 for 245 contacts (-51.0/contact) +
2D Compatibility (PS) -5399 + (NN) -4417 + (LL) 284
1D Compatibility (HY) -800 + (ID) 650
Total energy: -23488.0 ( -95.87 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_1PGY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PGY-query.scw
PDB file :
Tito_Scwrl_1PGY.pdb
: