Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASSTTFVIVGGGLAGAKAVEALRRSDFGGRIILFGDEEHLPYDRPPLSKEFLAGKKSLSDFTIQTSDWYRDHDVDVRLGVRVSSLDRSAHTVELPDGAAVRYDKLLLATGSAPRRPPIPGSDAAGVHYLRSYNDAVALNSVLVQGSSLAVVGAGWIGLEVAASARQRGVDVTVVETAIQPLLAALGEAVGKVFADLHRDQGVDLRLQTQLEEITAADGKATGLKMRDGSTVAADAVLVAVGAKPNVELAQQAGLAMGEGGVLVDASLRTSDPDIYAVGDIAAAEHPLLGTRVRTEHWANALKQPAVAAAGMLGRPGE--YAELPYLFTDQYDLGMEYVGHAPSCDRVVFRGNVA--GREFLSFWLDGDSRVLAGMNVNVWDVVDDVKGLIRSGNPVDVDRLVDPQWPLADLTTN
2YVJ Chain:P ((11-402))-------VVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAH----GDAEKIRLDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSV--TGSVDGV---VLLDDGTRIAADMVVVGIGVLANDALARAAGLAC-DDGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQ-GIAVARHLVDPTAPGYAELPWYWSDQGALRIQVAGLA-SGDEEIVRGEVSLDAPKFTLIELQ-KGRIVGATCVNNARDFAPLRRLLAVGAKPDRAALADPATDLRKL---


General information:
TITO was launched using:
RESULT:

Template: 2YVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -255986 for 3363 contacts (-76.1/contact) +
2D Compatibility (PS) -41894 + (NN) -21732 + (LL) 440
1D Compatibility (HY) -24800 + (ID) 7750
Total energy: -351722.0 ( -104.59 by residue)
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_2YVJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YVJ-query.scw
PDB file : Tito_Scwrl_2YVJ.pdb: