Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGDQELELRFDVPLYTLAEASRYLVVPRATLATWADGYERRPANAPAVQGQPIITALPHPTGSHARLPFVGIAEAYVLNAFR-RAGVPMQRIRPSLDWLIKNVGPHALASQDLCTDGAEVLWRFAERSGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQISFADDNLASMIRLPQYGDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGVTPDQLRDALDAIAA |
| 3UCS Chain:A ((3-78)) | ----------TVTVTFTITELCLRTGVSEEELTEIVGLG----------MIEPHQP-----QADTWLFDDSAVTIVHRAVRLRNELELDWPGIAVALTLLD------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UCS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29395 for 489 contacts (-60.1/contact) +
2D Compatibility (PS) -8071 + (NN) -1351 + (LL) 9316
1D Compatibility (HY) 400 + (ID) 450
Total energy: -29551.0 ( -60.43 by residue)
QMean score : 0.402
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