Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTSTTIRVSTQTRDRLAAQARERGISMSALLTELAAQAERQAIFRAEREASHAETTTQAVRDEDREWEGTVGDGLG
2MDV Chain:A ((2-37))
---WLCIWLSDQTLEDLEKMARREGLSKSEMINVALQHY--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2MDV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8906 for 186 contacts (-47.9/contact) +
2D Compatibility (PS) -4213 + (NN) -3268 + (LL) 2780
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -15707.0 ( -84.45 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_2MDV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MDV-query.scw
PDB file :
Tito_Scwrl_2MDV.pdb
: