Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTLSGFWHWAVANLPANVTELPEGVGD--GRELPGGALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFNLFQHAIARAVIFGTYEQR
1FUX Chain:A ((0-162))
---------------EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK
General information:
TITO was launched using:
RESULT:
Template:
1FUX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22042 for 1279 contacts (-17.2/contact) +
2D Compatibility (PS) -17230 + (NN) -12575 + (LL) 444
1D Compatibility (HY) 10800 + (ID) 650
Total energy: -41253.0 ( -32.25 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_1FUX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FUX-query.scw
PDB file :
Tito_Scwrl_1FUX.pdb
: