Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRAPGSTLARVGSIPAGDDVLDPDEPTYDLPRVAELLGVPVSKVAQQLREGHLVAVRRA-------GGVVIPQVFFTNSGQVVKSLPGLLTILHDGGYRDTEIMRWLFTPDPSLTITRDGSRDAVSNARPVDALHAHQAREVVRRAQAMAY
4LHF Chain:A ((7-65))
------------------------LMTDAIPYQEFAKLIGKSTGAVRRMIDKGKLPVIDMTDPQSASAGEYWVYLPAWNNG------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4LHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32987 for 304 contacts (-108.5/contact) +
2D Compatibility (PS) -5520 + (NN) -2834 + (LL) 5232
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -39709.0 ( -130.62 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_4LHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LHF-query.scw
PDB file :
Tito_Scwrl_4LHF.pdb
: