Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEQTIYGANTPGGSGPRTKIRTHHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGD-AAEQTIADAIAVAEAGAFAVVMEMVPAELATQITGKLTIPTVGIGAGPNCDGQVLVWQDMAGFSGAKTARFVKRYADVGGELRRAAMQYAQEVAGGVFPADEHSF
1M3U Chain:F ((9-263))-------------------------LQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAY-ATPEQAFENAATVMR-AGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFL-----IRAAVRQYMAEVESGVYPGEEHSF


General information:
TITO was launched using:
RESULT:

Template: 1M3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -204215 for 2211 contacts (-92.4/contact) +
2D Compatibility (PS) -27368 + (NN) -11534 + (LL) 436
1D Compatibility (HY) -22800 + (ID) 5850
Total energy: -271331.0 ( -122.72 by residue)
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_1M3U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M3U-query.scw
PDB file : Tito_Scwrl_1M3U.pdb: