Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVAMLFYVDTLPDTGAVAVVDGDEGFHAATVRRIRPGEQLVLGDGVGRLARCVVEQAGRGGLRARVLR-RWSVPPVRPPVTVVQALPKSERSELAIELATEAGADAFLAWQAARCVANWDGARVDKGLRRWRAVVRSAARQSRRARIPPVDGVLSTPMLVQRVREEVAAGAAVLVLHEEATERIVDIAAAQAGSLMLVVGPEGGIAPDELAALTDAGAVAVRLGPTVLRTSTAAAVALGAVGVLTSRWDASASDCEYCDVTRR |
1V6Z Chain:A ((11-227)) | ---------------LTGVLPLRETRHLVEVLRARVGDRFTVFDG-EREALAEVVDLGPP-LRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEM---GEGKLRRLRAVALEAAKQSGRVVVPEVLPPIPLKAVPQVA--------QGLVAHVGATARVREV-LDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAETAALALLALCTAGEG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V6Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78573 for 1662 contacts (-47.3/contact) +
2D Compatibility (PS) -22874 + (NN) -3244 + (LL) 3040
1D Compatibility (HY) 4800 + (ID) 1900
Total energy: -98751.0 ( -59.42 by residue)
QMean score : 0.193
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