Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLVAPVSPSTASSRTDT
4XY3 Chain:A ((130-283))
----FMDLKEAARKLETGDQGASLAHFADGWNTFNLTLQGDVKRFR-----GFDNWEGDAATACEASLDQQRQWILHMAKLSAAMAKQAQYVAQLHVWARREHPTYEDIVGLERLYAEN---------PSARDQILPVYAEYQQRSEKVLTEYNNKAA--LEPVNPPKPPPAIK--------------------
General information:
TITO was launched using:
RESULT:
Template:
4XY3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27839 for 928 contacts (-30.0/contact) +
2D Compatibility (PS) -16511 + (NN) -7744 + (LL) 2296
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: -52098.0 ( -56.14 by residue)
QMean score : 0.328
(partial model without unconserved sides chains):
PDB file :
Tito_4XY3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XY3-query.scw
PDB file :
Tito_Scwrl_4XY3.pdb
: