Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDSGQLGAADTPLRLLSSVHYLTDGELPQLYDYPDDGTWLRANFISSLDGGATVDGTSGAMAGPGDRFVFNLLRELADVIVVGVGTVRIEGYSGVRMGVVQRQHRQARGQSEVPQLAIVTRSGRLDRDMAVFTRT---EMAPLVLTTTAVA-----DDTRQRL-AGLAEVIACSGDDPGTVDEAVLVSQLAARGLRRILTEGGPTLLGTFVERDVLDELCLTIAPYVVGGLARRIVTGPG--QVLTRMRCAHVLTDDSGYLYTRYVKT |
2P4G Chain:A ((31-260)) | -----------------------------------INEPECRAIAITSINGSATLSGVSGPMGDQTDADLLIQLRGWADAIVVGAETARKENYGPVVLPHGIKNQRQKLGRCGLPKLTLLSKSLYFDFSSELFSPDLPSELSPLVITQQPANNSEQWDQRLQKLIDVGVEVIVAPTS---TNPLKIAFDALHARRLKKISIEGGPSVYRQALSLGIVDRLHLTIAPNIICPVESPLFGKISDDSFTTRLVLEMLSSSPNGLIFSRYKV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130490 for 1681 contacts (-77.6/contact) +
2D Compatibility (PS) -24085 + (NN) -9284 + (LL) 988
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -178971.0 ( -106.47 by residue)
QMean score : 0.423
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