Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIFAKGHGTQNDFVLLPDVDA-ELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVLDSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYL-RASGLEVRDEFVVGSLAGPRPVTCHHVEAAYADVSVDMG----------------KANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQ----LTVDGLAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAALAAVGSPTGTLTVHVPGG--EVVVTVTDATSFLRGPSVLVARGDLADDWWNAMG |
3EJX Chain:D ((29-307)) | --FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIF--------------AMP-GVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAG---LIVPEIQDD-GQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIG-PKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVAAVLE-GRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149446 for 2242 contacts (-66.7/contact) +
2D Compatibility (PS) -27487 + (NN) -7742 + (LL) 2400
1D Compatibility (HY) -15600 + (ID) 4900
Total energy: -202775.0 ( -90.44 by residue)
QMean score : 0.321
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