Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLADRDSIFEYTYEDIVVKNYDPHPAIKAPVAV
3QJ7 Chain:D ((2-264))
MTPYEDLLRFVLETGTPKS---GTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLADRDSIFEYTYEDIVVKNYDPHPAIKAPVAV
General information:
TITO was launched using:
RESULT:
Template:
3QJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -188029 for 2015 contacts (-93.3/contact) +
2D Compatibility (PS) -27941 + (NN) -16326 + (LL) 76
1D Compatibility (HY) -39200 + (ID) 13000
Total energy: -284420.0 ( -141.15 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_3QJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QJ7-query.scw
PDB file :
Tito_Scwrl_3QJ7.pdb
: