Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLDLTGRTAIITGASRGIGLAIAQQLAAAGAHVVLTARRQEAADEAAAQVGDRAL---GVGAHAVDEDAARRCVDLTLERFGSVDILINNAGTNPAYGPLLEQDHARFAKIFDVNLWAPLMWTSLVVTAWMGEHGGAVVNTASIGGMHQSPAMGMYNATKAALIHVTKQLALELSPR-IRVNAICPGVVRTRLAEALWKD--HEDPLAATIALGRIGEPADIASAVAFLVSDAASWITGETMIIDGGLLLGNALGFRAAPSTEH
2ZAT Chain:D ((12-255))
-----LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGG-----------------
General information:
TITO was launched using:
RESULT:
Template:
2ZAT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166479 for 2066 contacts (-80.6/contact) +
2D Compatibility (PS) -25836 + (NN) -11364 + (LL) 1308
1D Compatibility (HY) -24000 + (ID) 4700
Total energy: -231071.0 ( -111.84 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_2ZAT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZAT-query.scw
PDB file :
Tito_Scwrl_2ZAT.pdb
: