Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTIDPRSELVDGRRRAGARVDAVGAAALLSAAARVGVVCHVHPDADTIGAGLALALVLDG-CGKRVEVSFAAPATLPESLRSLPG-CH----LLVRPEVMRRDVDLVVTVDIPSVDRLGALGDLTDSGRELLVIDHHASNDLFG--T-ANFIDPSADSTTTMVAEILDAWGKPIDPRVAHCIYAGLATDTGSFRWA--SVRGYRLAARLVE-IGVDNATVSRTLMDSHPFTWLPLLSRVL-GSAQLVSEAVGGRGLVYVVVDNREWVAA-R-SEEVESIVDIVRTTQQAEVAAVF-KEVE--PHRWSVSMRAKTVNLAAVASGFGGGGHRLAAGYTTTGSIDDAVASLRAALG |
| 1K20 Chain:A ((1-298)) | ---------------------------------SKILVFGHQNPDSDAIGSSYAFAYLAREAYGLDTEAVALG--EPNEETAFVLDYFGVAAPRVITSAK-AEGAEQVILTDHNEFQQSVAD---IAEVEVYGVVDHHRVANFETANPLYMRLEP-VGSASSIVYRMFKEHSVAVSKEIAGLMLSGLISDTLLLKSPTTHPTDKAIAPELAELAGVNLEEYGLAMLKAGTNLASKSAEELIDIDAKTFE--LNGNNVRVAQVNTVDIAEVLERQAEIEAAIEKAIADNGYSDFVLMITDIINSNSEILAIGSNM-DKVEAAFNFVLENNHAFLAGAVSRKK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174797 for 2388 contacts (-73.2/contact) +
2D Compatibility (PS) -30210 + (NN) -8659 + (LL) 3920
1D Compatibility (HY) -4400 + (ID) 2050
Total energy: -216196.0 ( -90.53 by residue)
QMean score : 0.420
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