Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSP------------------------EDHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPS-D-----GR--WWNTISSAPDLIRYYDMLLDGS-GGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGLY-AEPVAVKQGWM-CCIGSSWMHLSTGVI-GP-ERRYIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 4M3K Chain:A ((3-240)) | --------------------------------------------------------------------------MKDDFAKLEEQ---FDAKLGIFALDTGTNRTVAYRPDERFAFASTIKALTVGVLLQQK--SIEDLNQRITYTRDDLVNYNPITEKHVDTGMTLKELADASLRYSDNAAQNLILKQIGGPESLKKELRKIGDEVTNPERFEPELNEVNPGETQDTSTARALVTSLRAFALEDPGKLPSEKRELLIDWMKRN------TTG-DALIRAGVPDGWEVADKTGAASYG-----TRNDIAIIWPPKGDPVVLAVLSSRDK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94845 for 1668 contacts (-56.9/contact) +
2D Compatibility (PS) -22534 + (NN) -12391 + (LL) 8104
1D Compatibility (HY) -1600 + (ID) 2050
Total energy: -125316.0 ( -75.13 by residue)
QMean score : 0.503
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