Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVS-KLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVV-GKVPDCINSGKYI-----EKVD---GLAAAVNVHATPTVRVNGTEYEWS-TPAALVAKIKEIVGDVPGIDSAAATATS |
| 3BCI Chain:A ((14-178)) | ----------------------------------------------------------------------------GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLG-----KDSIVGSRASHAVLMYAPKSFLDFQKQLFA--AQQDENK-EWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKD----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87340 for 1173 contacts (-74.5/contact) +
2D Compatibility (PS) -15819 + (NN) -2197 + (LL) 4820
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -106936.0 ( -91.16 by residue)
QMean score : 0.453
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