Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTVAAYAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQP--NYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNS--IGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGANTR---VAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGLRLGAKSYYATADPDT-FRKLRGGFDLILNTVSA--NLDLGQYLNLLDVDGTLVELGIP--EHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIEL--IEPDYINDAYERVLASDVRYRFVIDISAL |
| 4OAQ Chain:B ((27-359)) | -------------------SYERKQINPHDVVLKNEVCGLCYSDIHTLSAGW-QPLQRDNLVVGHEIIGEVIAVGDEVTEFKVGDRVGIGAASSSCRSCQRCDSDNEQYCKQGAA-TYNSKDVRSNNYVTQGGYSSHSIADEKFVFAIPEDLPSSYGAPLMCAGITVFSPLIR-NLGLDARGKNVGIIGIGGLGHLALQFANAMGANVTAFSRSSSKKEQAMKLGAHDFVATGEDKTWYKNYDDHFDFILNCASGIDGLNLSEYLSTLKVDKKFVSVGLPPSEDKFEVSPFTFLQQGASFGSSLLGSKTEVKEMLNLAAKHNVRPMIEEVPISEENCAKALDRCHAGDVRYRFVF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OAQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202773 for 2758 contacts (-73.5/contact) +
2D Compatibility (PS) -33984 + (NN) -11747 + (LL) 2312
1D Compatibility (HY) -27200 + (ID) 7350
Total energy: -280742.0 ( -101.79 by residue)
QMean score : 0.478
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